BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031G01SP1|AL429446
(402 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig171 641 0.0
>3x_Contig171
Length = 902
Score = 641 bits (308), Expect = 0.0
Identities = 362/397 (91%)
Strand = Plus / Minus
Query: 6 aatatagtcaaattatatatatattattatatataataagtkaagtattatgtaaacata 65
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 618 aatatagtcaaattatatatatattattatatataataagttaagtattatgtaaacata 559
Query: 66 ttatgtaagawtatatgacaaactagttctwtgactaaatattatkadtdagcaaattkg 125
|||||||||| |||| |||||||||||||| ||||||||||||| | | ||||||||
Sbjct: 558 ttatgtaagaatataggacaaactagttctaagactaaatattattaataagcaaattaa 499
Query: 126 ttaccgtaagggaaaataagtaattggttattttataagcagttataaatatatattadk 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtaccgtaagggaaaataagtaattggttattttataagcagttataaatatatattaat 439
Query: 186 atattaataacgtaccttttgtataatgggtcagcaagtaattagtattagcaaaataat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atattaataacgtaccttttgtataatgggtcagcaagtaattagtattagcaaaataat 379
Query: 246 aattaaattwttwtwwataatttgaatataaacattgtatatataatttatatatatttk 305
||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aattaaattattataaataatttgaatataaacattgtatatataatttatatatatttt 319
Query: 306 knkatataaatratkkgkkrrkkttgkttgwsccgaaagcggacgatcttavtatgacca 365
|||||||| || | || ||| ||||||||||||||||||| ||||||||
Sbjct: 318 tatatataaataattagttaatattaattgacccgaaagcggacgatcttaatatgacca 259
Query: 366 gacggaaacggtcgaacaggttgatgttgcaatatca 402
|||||||||||||||||||||||||||||||||||||
Sbjct: 258 gacggaaacggtcgaacaggttgatgttgcaatatca 222
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5908
Number of Sequences: 1807
Number of extensions: 5908
Number of successful extensions: 521
Number of sequences better than 1.0e-20: 1
length of query: 402
length of database: 10,358,551
effective HSP length: 15
effective length of query: 387
effective length of database: 10,331,446
effective search space: 3998269602
effective search space used: 3998269602
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.4 bits)
S2: 48 (100.4 bits)